CAYSS: Cytometry Analysis of Yeast Spores Segregation

Installation

CAYSS depends on flowCore, cluster, KernSmooth, qpdf and stringr R packages.
As flowCore belongs to the BioConductor project, use BiocMananger to install CAYSS dependencies.
Open a R session and execute following commands:

if(!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager")
BiocManager::install(c("flowCore", "cluster", "KernSmooth", "qpdf", "stringr"))

Then download CAYSS last release from this page: <https://forgemia.inra.fr/gqe-base/cayss/-/releases>,
and launch the following command in a R session:

install.packages("cayss-x.y.z.tar.gz", type="source", repos=NULL)

Where x.y.z corresponds to the release number.

License

CAYSS is licenced under the GPL V3 as described below:

GNU General Public License

Version 3, 29 June 2007
Copyright © 2007 Free Software Foundation, Inc. <http://fsf.org/>

Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed.

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